WormMine: Gene WBGene00219229

• WormBase Gene ID: WBGene00219229
• Gene Name: mir-4934
• Sequence Name: W08D2.14
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by nfki-1 and alh-4 based on RNA-seq studies.
• Biotype: SO:0001265
• Genetic Position: IV :4.42791±
• Length (nt): 110

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00219229

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:W08D2.14b	W08D2.14b	21	IV: 9825334-9825354

Other

0 CDSs

0 RNAi Result

8 Allele

• gk964278
• gk964078
• gk964500
• gk962765
• gk963883
• gk963884
• gk964226
• gk964227

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00219229
• Start: 9825312
• End: 9825421
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrIV_9824581..9825311
• Length (nt): 731
• Chromosome Location: IV: 9824581-9825311
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in alh-4(hj221) deletion allele comparing to in N2.	N.A.	WBPaper00061653:alh-4(hj221)_downregulated
	Transcripts that showed significantly decreased expression in nfki-1(cer1) animals at L1 larva stage, comparing to in N2 animals.	Differentially expressed genes between wild type and knockouts were explored using DESeq2 R package (v.1.20.0) considering a threshold of adjusted p value < 0.01.	WBPaper00060445:nfki-1(cer1)_downregulated_L1

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00219229
• Start: 9825312
• End: 9825421
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 110

1 Sequence Ontology Term