WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W08D2.7 Sequence Name  W08D2.7
Length (nt)  3081   Chromosome Location  IV: 9825699-9825755
Chromosome . Primary Identifier  IV Chromosome Location . Start  9825699
Chromosome Location . End  9825755
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08D2.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06562 MTR-4 116.4 1026 Caenorhabditis elegans
 

Other

30 RNAi

WormBase ID
WBRNAi00009268
WBRNAi00054979
WBRNAi00075313
WBRNAi00075312
WBRNAi00026515
WBRNAi00099955
WBRNAi00083559
WBRNAi00083569
WBRNAi00083674
WBRNAi00100486
WBRNAi00036375
WBRNAi00083831
WBRNAi00100860
WBRNAi00099349
WBRNAi00099551
WBRNAi00099753
WBRNAi00101143
WBRNAi00008097
WBRNAi00075521
WBRNAi00080083
WBRNAi00080082
WBRNAi00100112
WBRNAi00080165
WBRNAi00100299
WBRNAi00064435
WBRNAi00100673
WBRNAi00101047
WBRNAi00101210
WBRNAi00083486
WBRNAi00083519

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W08D2.7 9825699 9825755 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012342 mtr-4 W08D2.7 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:W08D2.7 9825699 9825755 1
CDS:W08D2.7 9825817 9825849 1
CDS:W08D2.7 9825896 9826195 1
CDS:W08D2.7 9826241 9826323 1
CDS:W08D2.7 9826374 9826639 1
CDS:W08D2.7 9826685 9826783 1
CDS:W08D2.7 9826835 9826959 1
CDS:W08D2.7 9827008 9827334 1
CDS:W08D2.7 9827383 9827712 1
CDS:W08D2.7 9828095 9828245 1
CDS:W08D2.7 9828295 9828467 1
CDS:W08D2.7 9828521 9828606 1
CDS:W08D2.7 9828867 9828960 1
CDS:W08D2.7 9829007 9829189 1
CDS:W08D2.7 9829309 9829575 1
CDS:W08D2.7 9829620 9829805 1
CDS:W08D2.7 9829852 9830014 1
CDS:W08D2.7 9830325 9830482 1

1 Sequence

Length
3081

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W08D2.7.1 W08D2.7.1 3224   IV: 9825694-9830620