WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08D2.8.1 Sequence Name  W08D2.8.1
Length (nt)  1729   Chromosome Location  IV: 9832886-9834870
Chromosome . Primary Identifier  IV Chromosome Location . Start  9832886
Chromosome Location . End  9834870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08D2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002204 kin-21 W08D2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08D2.8 W08D2.8 1632   IV: 9832935-9833114

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08D2.8.1 9832886 9834870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138792   229   IV: 9832886-9833114 Caenorhabditis elegans
Exon138793   495   IV: 9833169-9833663 Caenorhabditis elegans
Exon138794   117   IV: 9833726-9833842 Caenorhabditis elegans
Exon138795   456   IV: 9833888-9834343 Caenorhabditis elegans
Exon138796   123   IV: 9834391-9834513 Caenorhabditis elegans
Exon138797   309   IV: 9834562-9834870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08D2.8.1 9832886 9834870 1

1 Sequence

Length
1729

1 Sequence Ontology Term

Identifier Name Description
transcript