WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07F5.17.1 Sequence Name  K07F5.17.1
Length (nt)  532   Chromosome Location  IV: 9842371-9843050
Chromosome . Primary Identifier  IV Chromosome Location . Start  9842371
Chromosome Location . End  9843050 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07F5.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045180 K07F5.17 K07F5.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07F5.17 K07F5.17 417   IV: 9842428-9842511

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07F5.17.1 9842371 9843050 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138807   141   IV: 9842371-9842511 Caenorhabditis elegans
Exon138808   100   IV: 9842555-9842654 Caenorhabditis elegans
Exon138809   50   IV: 9842702-9842751 Caenorhabditis elegans
Exon138810   241   IV: 9842810-9843050 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07F5.17.1 9842371 9843050 1

1 Sequence

Length
532

1 Sequence Ontology Term

Identifier Name Description
transcript