WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32B6.3.1 Sequence Name  F32B6.3.1
Length (nt)  1174   Chromosome Location  IV: 9882132-9884383
Chromosome . Primary Identifier  IV Chromosome Location . Start  9882132
Chromosome Location . End  9884383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32B6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009320 prp-18 F32B6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32B6.3 F32B6.3 1059   IV: 9882201-9882287

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.3.1 9882132 9884383 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138902   156   IV: 9882132-9882287 Caenorhabditis elegans
Exon138903   187   IV: 9882337-9882523 Caenorhabditis elegans
Exon138905   118   IV: 9883171-9883288 Caenorhabditis elegans
Exon138907   114   IV: 9883338-9883451 Caenorhabditis elegans
Exon138909   115   IV: 9883498-9883612 Caenorhabditis elegans
Exon138911   125   IV: 9883659-9883783 Caenorhabditis elegans
Exon138913   145   IV: 9883828-9883972 Caenorhabditis elegans
Exon138915   171   IV: 9884114-9884284 Caenorhabditis elegans
Exon138917   43   IV: 9884341-9884383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.3.1 9882132 9884383 -1

1 Sequence

Length
1174

1 Sequence Ontology Term

Identifier Name Description
transcript