WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32B6.2.1 Sequence Name  F32B6.2.1
Length (nt)  2202   Chromosome Location  IV: 9884570-9887151
Chromosome . Primary Identifier  IV Chromosome Location . Start  9884570
Chromosome Location . End  9887151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32B6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009319 mccc-1 F32B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32B6.2 F32B6.2 2016   IV: 9884570-9884761

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.2.1 9884570 9887151 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138918   192   IV: 9884570-9884761 Caenorhabditis elegans
Exon138920   313   IV: 9884810-9885122 Caenorhabditis elegans
Exon138921   288   IV: 9885170-9885457 Caenorhabditis elegans
Exon138922   171   IV: 9885508-9885678 Caenorhabditis elegans
Exon138923   248   IV: 9885730-9885977 Caenorhabditis elegans
Exon138924   328   IV: 9886023-9886350 Caenorhabditis elegans
Exon138925   185   IV: 9886397-9886581 Caenorhabditis elegans
Exon138926   144   IV: 9886630-9886773 Caenorhabditis elegans
Exon138927   333   IV: 9886819-9887151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.2.1 9884570 9887151 1

1 Sequence

Length
2202

1 Sequence Ontology Term

Identifier Name Description
transcript