WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32B6.10b.1 Sequence Name  F32B6.10b.1
Length (nt)  1668   Chromosome Location  IV: 9887190-9889929
Chromosome . Primary Identifier  IV Chromosome Location . Start  9887190
Chromosome Location . End  9889929 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32B6.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009324 ttbk-3 F32B6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32B6.10b F32B6.10b 1668   IV: 9887190-9887534

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.10b.1 9887190 9889929 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138929   345   IV: 9887190-9887534 Caenorhabditis elegans
Exon138931   141   IV: 9887603-9887743 Caenorhabditis elegans
Exon138933   151   IV: 9887788-9887938 Caenorhabditis elegans
Exon138935   299   IV: 9888361-9888659 Caenorhabditis elegans
Exon138937   156   IV: 9888907-9889062 Caenorhabditis elegans
Exon138939   104   IV: 9889106-9889209 Caenorhabditis elegans
Exon138941   227   IV: 9889258-9889484 Caenorhabditis elegans
Exon138943   236   IV: 9889637-9889872 Caenorhabditis elegans
Exon138944   9   IV: 9889921-9889929 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.10b.1 9887190 9889929 -1

1 Sequence

Length
1668

1 Sequence Ontology Term

Identifier Name Description
transcript