WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32B6.8a.1 Sequence Name  F32B6.8a.1
Length (nt)  1792   Chromosome Location  IV: 9899012-9902513
Chromosome . Primary Identifier  IV Chromosome Location . Start  9899012
Chromosome Location . End  9902513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32B6.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009322 tbc-3 F32B6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32B6.8a F32B6.8a 1428   IV: 9899012-9899094

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.8a.1 9899012 9902513 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138958   83   IV: 9899012-9899094 Caenorhabditis elegans
Exon138961   188   IV: 9899909-9900096 Caenorhabditis elegans
Exon138963   120   IV: 9900317-9900436 Caenorhabditis elegans
Exon138965   170   IV: 9900485-9900654 Caenorhabditis elegans
Exon138967   129   IV: 9900699-9900827 Caenorhabditis elegans
Exon138969   66   IV: 9900876-9900941 Caenorhabditis elegans
Exon138971   228   IV: 9901082-9901309 Caenorhabditis elegans
Exon138973   76   IV: 9901351-9901426 Caenorhabditis elegans
Exon138975   128   IV: 9901478-9901605 Caenorhabditis elegans
Exon138977   96   IV: 9901656-9901751 Caenorhabditis elegans
Exon138980   508   IV: 9902006-9902513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.8a.1 9899012 9902513 1

1 Sequence

Length
1792

1 Sequence Ontology Term

Identifier Name Description
transcript