WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32B6.8b.1 Sequence Name  F32B6.8b.1
Length (nt)  1852   Chromosome Location  IV: 9899564-9902500
Chromosome . Primary Identifier  IV Chromosome Location . Start  9899564
Chromosome Location . End  9902500 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32B6.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009322 tbc-3 F32B6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32B6.8b F32B6.8b 1488   IV: 9899577-9899611

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.8b.1 9899564 9902500 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138959   48   IV: 9899564-9899611 Caenorhabditis elegans
Exon138960   108   IV: 9899663-9899770 Caenorhabditis elegans
Exon138962   188   IV: 9899909-9900096 Caenorhabditis elegans
Exon138964   120   IV: 9900317-9900436 Caenorhabditis elegans
Exon138966   170   IV: 9900485-9900654 Caenorhabditis elegans
Exon138968   129   IV: 9900699-9900827 Caenorhabditis elegans
Exon138970   66   IV: 9900876-9900941 Caenorhabditis elegans
Exon138972   228   IV: 9901082-9901309 Caenorhabditis elegans
Exon138974   76   IV: 9901351-9901426 Caenorhabditis elegans
Exon138976   128   IV: 9901478-9901605 Caenorhabditis elegans
Exon138978   96   IV: 9901656-9901751 Caenorhabditis elegans
Exon138979   495   IV: 9902006-9902500 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32B6.8b.1 9899564 9902500 1

1 Sequence

Length
1852

1 Sequence Ontology Term

Identifier Name Description
transcript