WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.5m.1 Sequence Name  F25H8.5m.1
Length (nt)  841   Chromosome Location  IV: 9921938-9928230
Chromosome . Primary Identifier  IV Chromosome Location . Start  9921938
Chromosome Location . End  9928230 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.5m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001113 dur-1 F25H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.5m F25H8.5m 501   IV: 9922051-9922097

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.5m.1 9921938 9928230 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139015   160   IV: 9921938-9922097 Caenorhabditis elegans
Exon139042   120   IV: 9922151-9922270 Caenorhabditis elegans
Exon139059   87   IV: 9922317-9922403 Caenorhabditis elegans
Exon139076   66   IV: 9922461-9922526 Caenorhabditis elegans
Exon139225   87   IV: 9924247-9924333 Caenorhabditis elegans
Exon139240   66   IV: 9924470-9924535 Caenorhabditis elegans
Exon139255   66   IV: 9924586-9924651 Caenorhabditis elegans
Exon139268   54   IV: 9924705-9924758 Caenorhabditis elegans
Exon139320   58   IV: 9927575-9927632 Caenorhabditis elegans
Exon139335   77   IV: 9928154-9928230 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.5m.1 9921938 9928230 -1

1 Sequence

Length
841

1 Sequence Ontology Term

Identifier Name Description
transcript