WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.5m.2 Sequence Name  F25H8.5m.2
Length (nt)  765   Chromosome Location  IV: 9921940-9927635
Chromosome . Primary Identifier  IV Chromosome Location . Start  9921940
Chromosome Location . End  9927635 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.5m.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001113 dur-1 F25H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.5m F25H8.5m 501   IV: 9922051-9922097

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.5m.2 9921940 9927635 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139018   158   IV: 9921940-9922097 Caenorhabditis elegans
Exon139043   120   IV: 9922151-9922270 Caenorhabditis elegans
Exon139060   87   IV: 9922317-9922403 Caenorhabditis elegans
Exon139077   66   IV: 9922461-9922526 Caenorhabditis elegans
Exon139226   87   IV: 9924247-9924333 Caenorhabditis elegans
Exon139241   66   IV: 9924470-9924535 Caenorhabditis elegans
Exon139256   66   IV: 9924586-9924651 Caenorhabditis elegans
Exon139269   54   IV: 9924705-9924758 Caenorhabditis elegans
Exon139323   61   IV: 9927575-9927635 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.5m.2 9921940 9927635 -1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
transcript