WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.5n.1 Sequence Name  F25H8.5n.1
Length (nt)  498   Chromosome Location  IV: 9922051-9923745
Chromosome . Primary Identifier  IV Chromosome Location . Start  9922051
Chromosome Location . End  9923745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.5n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001113 dur-1 F25H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.5n F25H8.5n 498   IV: 9922051-9922097

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.5n.1 9922051 9923745 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139021   47   IV: 9922051-9922097 Caenorhabditis elegans
Exon139044   120   IV: 9922151-9922270 Caenorhabditis elegans
Exon139061   87   IV: 9922317-9922403 Caenorhabditis elegans
Exon139078   66   IV: 9922461-9922526 Caenorhabditis elegans
Exon139093   120   IV: 9922576-9922695 Caenorhabditis elegans
Exon139188   58   IV: 9923688-9923745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.5n.1 9922051 9923745 -1

1 Sequence

Length
498

1 Sequence Ontology Term

Identifier Name Description
transcript