WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.3a.2 Sequence Name  F25H8.3a.2
Length (nt)  7704   Chromosome Location  IV: 9934206-9946497
Chromosome . Primary Identifier  IV Chromosome Location . Start  9934206
Chromosome Location . End  9946497 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001650 gon-1 F25H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.3a F25H8.3a 6453   IV: 9935067-9935237

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3a.2 9934206 9946497 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139356   1032   IV: 9934206-9935237 Caenorhabditis elegans
Exon139360   197   IV: 9935286-9935482 Caenorhabditis elegans
Exon139364   137   IV: 9935580-9935716 Caenorhabditis elegans
Exon139368   181   IV: 9935765-9935945 Caenorhabditis elegans
Exon139372   352   IV: 9935992-9936343 Caenorhabditis elegans
Exon139376   174   IV: 9936390-9936563 Caenorhabditis elegans
Exon139380   174   IV: 9937037-9937210 Caenorhabditis elegans
Exon139384   171   IV: 9937270-9937440 Caenorhabditis elegans
Exon139388   282   IV: 9938620-9938901 Caenorhabditis elegans
Exon139392   159   IV: 9938946-9939104 Caenorhabditis elegans
Exon139396   486   IV: 9939156-9939641 Caenorhabditis elegans
Exon139400   261   IV: 9939688-9939948 Caenorhabditis elegans
Exon139404   871   IV: 9940006-9940876 Caenorhabditis elegans
Exon139408   442   IV: 9940928-9941369 Caenorhabditis elegans
Exon139412   210   IV: 9941467-9941676 Caenorhabditis elegans
Exon139416   329   IV: 9941727-9942055 Caenorhabditis elegans
Exon139421   149   IV: 9942444-9942592 Caenorhabditis elegans
Exon139425   111   IV: 9942648-9942758 Caenorhabditis elegans
Exon139429   157   IV: 9942809-9942965 Caenorhabditis elegans
Exon139433   95   IV: 9943015-9943109 Caenorhabditis elegans
Exon139437   548   IV: 9943155-9943702 Caenorhabditis elegans
Exon139443   150   IV: 9944733-9944882 Caenorhabditis elegans
Exon139447   67   IV: 9944927-9944993 Caenorhabditis elegans
Exon139451   175   IV: 9945037-9945211 Caenorhabditis elegans
Exon139455   250   IV: 9945262-9945511 Caenorhabditis elegans
Exon139459   63   IV: 9945559-9945621 Caenorhabditis elegans
Exon139464   357   IV: 9945685-9946041 Caenorhabditis elegans
Exon139468   124   IV: 9946374-9946497 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3a.2 9934206 9946497 -1

1 Sequence

Length
7704

1 Sequence Ontology Term

Identifier Name Description
transcript