WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.3b.1 Sequence Name  F25H8.3b.1
Length (nt)  6498   Chromosome Location  IV: 9935067-9945775
Chromosome . Primary Identifier  IV Chromosome Location . Start  9935067
Chromosome Location . End  9945775 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001650 gon-1 F25H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.3b F25H8.3b 6498   IV: 9935067-9935237

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.3b.1 9935067 9945775 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139357   171   IV: 9935067-9935237 Caenorhabditis elegans
Exon139361   197   IV: 9935286-9935482 Caenorhabditis elegans
Exon139365   137   IV: 9935580-9935716 Caenorhabditis elegans
Exon139369   181   IV: 9935765-9935945 Caenorhabditis elegans
Exon139373   352   IV: 9935992-9936343 Caenorhabditis elegans
Exon139377   174   IV: 9936390-9936563 Caenorhabditis elegans
Exon139381   174   IV: 9937037-9937210 Caenorhabditis elegans
Exon139385   171   IV: 9937270-9937440 Caenorhabditis elegans
Exon139389   282   IV: 9938620-9938901 Caenorhabditis elegans
Exon139393   159   IV: 9938946-9939104 Caenorhabditis elegans
Exon139397   486   IV: 9939156-9939641 Caenorhabditis elegans
Exon139401   261   IV: 9939688-9939948 Caenorhabditis elegans
Exon139405   871   IV: 9940006-9940876 Caenorhabditis elegans
Exon139409   442   IV: 9940928-9941369 Caenorhabditis elegans
Exon139413   210   IV: 9941467-9941676 Caenorhabditis elegans
Exon139417   329   IV: 9941727-9942055 Caenorhabditis elegans
Exon139419   45   IV: 9942311-9942355 Caenorhabditis elegans
Exon139422   149   IV: 9942444-9942592 Caenorhabditis elegans
Exon139426   111   IV: 9942648-9942758 Caenorhabditis elegans
Exon139430   157   IV: 9942809-9942965 Caenorhabditis elegans
Exon139434   95   IV: 9943015-9943109 Caenorhabditis elegans
Exon139438   548   IV: 9943155-9943702 Caenorhabditis elegans
Exon139444   150   IV: 9944733-9944882 Caenorhabditis elegans
Exon139448   67   IV: 9944927-9944993 Caenorhabditis elegans
Exon139452   175   IV: 9945037-9945211 Caenorhabditis elegans
Exon139456   250   IV: 9945262-9945511 Caenorhabditis elegans
Exon139460   63   IV: 9945559-9945621 Caenorhabditis elegans
Exon139462   91   IV: 9945685-9945775 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.3b.1 9935067 9945775 -1

1 Sequence

Length
6498

1 Sequence Ontology Term

Identifier Name Description
transcript