WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.3a.2 Sequence Name  F25H8.3a.2
Length (nt)  7704   Chromosome Location  IV: 9934206-9946497
Chromosome . Primary Identifier  IV Chromosome Location . Start  9934206
Chromosome Location . End  9946497 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001650 gon-1 F25H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.3a F25H8.3a 6453   IV: 9935067-9935237

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3a.2 9934206 9946497 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139376   1032   IV: 9934206-9935237 Caenorhabditis elegans
Exon139381   197   IV: 9935286-9935482 Caenorhabditis elegans
Exon139385   137   IV: 9935580-9935716 Caenorhabditis elegans
Exon139389   181   IV: 9935765-9935945 Caenorhabditis elegans
Exon139393   352   IV: 9935992-9936343 Caenorhabditis elegans
Exon139397   174   IV: 9936390-9936563 Caenorhabditis elegans
Exon139401   174   IV: 9937037-9937210 Caenorhabditis elegans
Exon139405   171   IV: 9937270-9937440 Caenorhabditis elegans
Exon139409   282   IV: 9938620-9938901 Caenorhabditis elegans
Exon139413   159   IV: 9938946-9939104 Caenorhabditis elegans
Exon139417   486   IV: 9939156-9939641 Caenorhabditis elegans
Exon139421   261   IV: 9939688-9939948 Caenorhabditis elegans
Exon139425   871   IV: 9940006-9940876 Caenorhabditis elegans
Exon139429   442   IV: 9940928-9941369 Caenorhabditis elegans
Exon139433   210   IV: 9941467-9941676 Caenorhabditis elegans
Exon139437   329   IV: 9941727-9942055 Caenorhabditis elegans
Exon139442   149   IV: 9942444-9942592 Caenorhabditis elegans
Exon139446   111   IV: 9942648-9942758 Caenorhabditis elegans
Exon139450   157   IV: 9942809-9942965 Caenorhabditis elegans
Exon139454   95   IV: 9943015-9943109 Caenorhabditis elegans
Exon139458   548   IV: 9943155-9943702 Caenorhabditis elegans
Exon139464   150   IV: 9944733-9944882 Caenorhabditis elegans
Exon139468   67   IV: 9944927-9944993 Caenorhabditis elegans
Exon139472   175   IV: 9945037-9945211 Caenorhabditis elegans
Exon139476   250   IV: 9945262-9945511 Caenorhabditis elegans
Exon139480   63   IV: 9945559-9945621 Caenorhabditis elegans
Exon139485   357   IV: 9945685-9946041 Caenorhabditis elegans
Exon139489   124   IV: 9946374-9946497 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3a.2 9934206 9946497 -1

1 Sequence

Length
7704

1 Sequence Ontology Term

Identifier Name Description
transcript