WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.3a.1 Sequence Name  F25H8.3a.1
Length (nt)  7818   Chromosome Location  IV: 9934206-9953433
Chromosome . Primary Identifier  IV Chromosome Location . Start  9934206
Chromosome Location . End  9953433 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001650 gon-1 F25H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.3a F25H8.3a 6453   IV: 9935067-9935237

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3a.1 9934206 9953433 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139377   1032   IV: 9934206-9935237 Caenorhabditis elegans
Exon139380   197   IV: 9935286-9935482 Caenorhabditis elegans
Exon139384   137   IV: 9935580-9935716 Caenorhabditis elegans
Exon139388   181   IV: 9935765-9935945 Caenorhabditis elegans
Exon139392   352   IV: 9935992-9936343 Caenorhabditis elegans
Exon139396   174   IV: 9936390-9936563 Caenorhabditis elegans
Exon139400   174   IV: 9937037-9937210 Caenorhabditis elegans
Exon139404   171   IV: 9937270-9937440 Caenorhabditis elegans
Exon139408   282   IV: 9938620-9938901 Caenorhabditis elegans
Exon139412   159   IV: 9938946-9939104 Caenorhabditis elegans
Exon139416   486   IV: 9939156-9939641 Caenorhabditis elegans
Exon139420   261   IV: 9939688-9939948 Caenorhabditis elegans
Exon139424   871   IV: 9940006-9940876 Caenorhabditis elegans
Exon139428   442   IV: 9940928-9941369 Caenorhabditis elegans
Exon139432   210   IV: 9941467-9941676 Caenorhabditis elegans
Exon139436   329   IV: 9941727-9942055 Caenorhabditis elegans
Exon139441   149   IV: 9942444-9942592 Caenorhabditis elegans
Exon139445   111   IV: 9942648-9942758 Caenorhabditis elegans
Exon139449   157   IV: 9942809-9942965 Caenorhabditis elegans
Exon139453   95   IV: 9943015-9943109 Caenorhabditis elegans
Exon139457   548   IV: 9943155-9943702 Caenorhabditis elegans
Exon139463   150   IV: 9944733-9944882 Caenorhabditis elegans
Exon139467   67   IV: 9944927-9944993 Caenorhabditis elegans
Exon139471   175   IV: 9945037-9945211 Caenorhabditis elegans
Exon139475   250   IV: 9945262-9945511 Caenorhabditis elegans
Exon139479   63   IV: 9945559-9945621 Caenorhabditis elegans
Exon139484   357   IV: 9945685-9946041 Caenorhabditis elegans
Exon139487   121   IV: 9946374-9946494 Caenorhabditis elegans
Exon139492   69   IV: 9949324-9949392 Caenorhabditis elegans
Exon139502   48   IV: 9953386-9953433 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3a.1 9934206 9953433 -1

1 Sequence

Length
7818

1 Sequence Ontology Term

Identifier Name Description
transcript