WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F25H8.3c Sequence Name  F25H8.3c
Length (nt)  6953   Chromosome Location  IV: 9935067-9953429
Chromosome . Primary Identifier  IV Chromosome Location . Start  9935067
Chromosome Location . End  9953429 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.3c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001650 gon-1 F25H8.3 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3c 9935067 9953429 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139379   171   IV: 9935067-9935237 Caenorhabditis elegans
Exon139383   197   IV: 9935286-9935482 Caenorhabditis elegans
Exon139387   137   IV: 9935580-9935716 Caenorhabditis elegans
Exon139391   181   IV: 9935765-9935945 Caenorhabditis elegans
Exon139395   352   IV: 9935992-9936343 Caenorhabditis elegans
Exon139399   174   IV: 9936390-9936563 Caenorhabditis elegans
Exon139403   174   IV: 9937037-9937210 Caenorhabditis elegans
Exon139407   171   IV: 9937270-9937440 Caenorhabditis elegans
Exon139411   282   IV: 9938620-9938901 Caenorhabditis elegans
Exon139415   159   IV: 9938946-9939104 Caenorhabditis elegans
Exon139419   486   IV: 9939156-9939641 Caenorhabditis elegans
Exon139423   261   IV: 9939688-9939948 Caenorhabditis elegans
Exon139427   871   IV: 9940006-9940876 Caenorhabditis elegans
Exon139431   442   IV: 9940928-9941369 Caenorhabditis elegans
Exon139435   210   IV: 9941467-9941676 Caenorhabditis elegans
Exon139439   329   IV: 9941727-9942055 Caenorhabditis elegans
Exon139444   149   IV: 9942444-9942592 Caenorhabditis elegans
Exon139448   111   IV: 9942648-9942758 Caenorhabditis elegans
Exon139452   157   IV: 9942809-9942965 Caenorhabditis elegans
Exon139456   95   IV: 9943015-9943109 Caenorhabditis elegans
Exon139460   548   IV: 9943155-9943702 Caenorhabditis elegans
Exon139466   150   IV: 9944733-9944882 Caenorhabditis elegans
Exon139470   67   IV: 9944927-9944993 Caenorhabditis elegans
Exon139474   175   IV: 9945037-9945211 Caenorhabditis elegans
Exon139478   250   IV: 9945262-9945511 Caenorhabditis elegans
Exon139482   63   IV: 9945559-9945621 Caenorhabditis elegans
Exon139486   357   IV: 9945685-9946041 Caenorhabditis elegans
Exon139488   121   IV: 9946374-9946494 Caenorhabditis elegans
Exon139493   69   IV: 9949324-9949392 Caenorhabditis elegans
Exon139501   44   IV: 9953386-9953429 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3c 9935067 9953429 -1

1 Sequence

Length
6953

1 Sequence Ontology Term

Identifier Name Description
transcript