WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47E12.11a Sequence Name  C47E12.11a
Length (nt)  1101   Chromosome Location  IV: 9969897-9970366
Chromosome . Primary Identifier  IV Chromosome Location . Start  9969897
Chromosome Location . End  9970366
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E12.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05455 C47E12.11, isoform a 41.4 366 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042674
WBRNAi00012074
WBRNAi00029909

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C47E12.11a 9969897 9970366 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008154 C47E12.11 C47E12.11 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C47E12.11a 9969897 9970366 1
CDS:C47E12.11a 9970421 9970516 1
CDS:C47E12.11a 9970561 9970666 1
CDS:C47E12.11a 9970725 9971050 1
CDS:C47E12.11a 9971098 9971200 1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47E12.11a.1 C47E12.11a.1 1230   IV: 9969400-9971258