WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44D12.1b.1 Sequence Name  F44D12.1b.1
Length (nt)  3336   Chromosome Location  IV: 10009806-10014191
Chromosome . Primary Identifier  IV Chromosome Location . Start  10009806
Chromosome Location . End  10014191 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44D12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009678 magu-4 F44D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44D12.1b F44D12.1b 3249   IV: 10009816-10010102

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44D12.1b.1 10009806 10014191 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139670   297   IV: 10009806-10010102 Caenorhabditis elegans
Exon139672   178   IV: 10010463-10010640 Caenorhabditis elegans
Exon139674   246   IV: 10010683-10010928 Caenorhabditis elegans
Exon139676   286   IV: 10011007-10011292 Caenorhabditis elegans
Exon139678   242   IV: 10011342-10011583 Caenorhabditis elegans
Exon139680   236   IV: 10011634-10011869 Caenorhabditis elegans
Exon139682   171   IV: 10011914-10012084 Caenorhabditis elegans
Exon139684   311   IV: 10012138-10012448 Caenorhabditis elegans
Exon139686   249   IV: 10012494-10012742 Caenorhabditis elegans
Exon139688   703   IV: 10012789-10013491 Caenorhabditis elegans
Exon139690   175   IV: 10013535-10013709 Caenorhabditis elegans
Exon139692   96   IV: 10013900-10013995 Caenorhabditis elegans
Exon139694   146   IV: 10014046-10014191 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44D12.1b.1 10009806 10014191 1

1 Sequence

Length
3336

1 Sequence Ontology Term

Identifier Name Description
transcript