WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44D12.1a.1 Sequence Name  F44D12.1a.1
Length (nt)  3411   Chromosome Location  IV: 10009753-10014207
Chromosome . Primary Identifier  IV Chromosome Location . Start  10009753
Chromosome Location . End  10014207 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44D12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009678 magu-4 F44D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44D12.1a F44D12.1a 3255   IV: 10009816-10010102

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44D12.1a.1 10009753 10014207 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139690   350   IV: 10009753-10010102 Caenorhabditis elegans
Exon139692   178   IV: 10010463-10010640 Caenorhabditis elegans
Exon139694   246   IV: 10010683-10010928 Caenorhabditis elegans
Exon139696   286   IV: 10011007-10011292 Caenorhabditis elegans
Exon139698   248   IV: 10011336-10011583 Caenorhabditis elegans
Exon139700   236   IV: 10011634-10011869 Caenorhabditis elegans
Exon139702   171   IV: 10011914-10012084 Caenorhabditis elegans
Exon139704   311   IV: 10012138-10012448 Caenorhabditis elegans
Exon139706   249   IV: 10012494-10012742 Caenorhabditis elegans
Exon139708   703   IV: 10012789-10013491 Caenorhabditis elegans
Exon139710   175   IV: 10013535-10013709 Caenorhabditis elegans
Exon139712   96   IV: 10013900-10013995 Caenorhabditis elegans
Exon139716   162   IV: 10014046-10014207 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44D12.1a.1 10009753 10014207 1

1 Sequence

Length
3411

1 Sequence Ontology Term

Identifier Name Description
transcript