WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44D12.9a.1 Sequence Name  F44D12.9a.1
Length (nt)  1424   Chromosome Location  IV: 10019263-10021290
Chromosome . Primary Identifier  IV Chromosome Location . Start  10019263
Chromosome Location . End  10021290 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44D12.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009686 ent-7 F44D12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44D12.9a F44D12.9a 1350   IV: 10019267-10019580

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44D12.9a.1 10019263 10021290 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139711   318   IV: 10019263-10019580 Caenorhabditis elegans
Exon139712   287   IV: 10019635-10019921 Caenorhabditis elegans
Exon139717   101   IV: 10019969-10020069 Caenorhabditis elegans
Exon139722   99   IV: 10020116-10020214 Caenorhabditis elegans
Exon139727   121   IV: 10020332-10020452 Caenorhabditis elegans
Exon139734   86   IV: 10020497-10020582 Caenorhabditis elegans
Exon139740   197   IV: 10020627-10020823 Caenorhabditis elegans
Exon139749   215   IV: 10021076-10021290 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44D12.9a.1 10019263 10021290 1

1 Sequence

Length
1424

1 Sequence Ontology Term

Identifier Name Description
transcript