WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44D12.8b.1 Sequence Name  F44D12.8b.1
Length (nt)  1341   Chromosome Location  IV: 10023337-10025226
Chromosome . Primary Identifier  IV Chromosome Location . Start  10023337
Chromosome Location . End  10025226 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44D12.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009685 F44D12.8 F44D12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44D12.8b F44D12.8b 1341   IV: 10023337-10023407

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44D12.8b.1 10023337 10025226 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139755   71   IV: 10023337-10023407 Caenorhabditis elegans
Exon139757   211   IV: 10023622-10023832 Caenorhabditis elegans
Exon139759   102   IV: 10023876-10023977 Caenorhabditis elegans
Exon139761   100   IV: 10024022-10024121 Caenorhabditis elegans
Exon139763   122   IV: 10024167-10024288 Caenorhabditis elegans
Exon139765   311   IV: 10024332-10024642 Caenorhabditis elegans
Exon139767   113   IV: 10024689-10024801 Caenorhabditis elegans
Exon139769   206   IV: 10024846-10025051 Caenorhabditis elegans
Exon139770   105   IV: 10025122-10025226 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44D12.8b.1 10023337 10025226 1

1 Sequence

Length
1341

1 Sequence Ontology Term

Identifier Name Description
transcript