WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04B2.8.1 Sequence Name  T04B2.8.1
Length (nt)  444   Chromosome Location  IV: 10050546-10051188
Chromosome . Primary Identifier  IV Chromosome Location . Start  10050546
Chromosome Location . End  10051188 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04B2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044018 T04B2.8 T04B2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B2.8 T04B2.8 336   IV: 10050581-10050623

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04B2.8.1 10050546 10051188 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139832   78   IV: 10050546-10050623 Caenorhabditis elegans
Exon139833   51   IV: 10050674-10050724 Caenorhabditis elegans
Exon139834   96   IV: 10050775-10050870 Caenorhabditis elegans
Exon139835   100   IV: 10050918-10051017 Caenorhabditis elegans
Exon139836   119   IV: 10051070-10051188 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04B2.8.1 10050546 10051188 -1

1 Sequence

Length
444

1 Sequence Ontology Term

Identifier Name Description
transcript