WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04B2.5.1 Sequence Name  T04B2.5.1
Length (nt)  2013   Chromosome Location  IV: 10056591-10059178
Chromosome . Primary Identifier  IV Chromosome Location . Start  10056591
Chromosome Location . End  10059178 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04B2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011423 ipla-7 T04B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B2.5 T04B2.5 1416   IV: 10057135-10057233

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04B2.5.1 10056591 10059178 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139853   643   IV: 10056591-10057233 Caenorhabditis elegans
Exon139855   857   IV: 10057279-10058135 Caenorhabditis elegans
Exon139857   316   IV: 10058184-10058499 Caenorhabditis elegans
Exon139859   197   IV: 10058982-10059178 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04B2.5.1 10056591 10059178 -1

1 Sequence

Length
2013

1 Sequence Ontology Term

Identifier Name Description
transcript