WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04B2.3a.1 Sequence Name  T04B2.3a.1
Length (nt)  1302   Chromosome Location  IV: 10047408-10050572
Chromosome . Primary Identifier  IV Chromosome Location . Start  10047408
Chromosome Location . End  10050572 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04B2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011422 T04B2.3 T04B2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B2.3a T04B2.3a 1239   IV: 10047408-10047525

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04B2.3a.1 10047408 10050572 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139872   118   IV: 10047408-10047525 Caenorhabditis elegans
Exon139873   111   IV: 10047898-10048008 Caenorhabditis elegans
Exon139874   123   IV: 10048054-10048176 Caenorhabditis elegans
Exon139875   95   IV: 10048609-10048703 Caenorhabditis elegans
Exon139877   153   IV: 10048748-10048900 Caenorhabditis elegans
Exon139879   312   IV: 10048944-10049255 Caenorhabditis elegans
Exon139881   123   IV: 10049300-10049422 Caenorhabditis elegans
Exon139883   75   IV: 10050261-10050335 Caenorhabditis elegans
Exon139886   192   IV: 10050381-10050572 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04B2.3a.1 10047408 10050572 1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
transcript