WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04B2.3b.1 Sequence Name  T04B2.3b.1
Length (nt)  810   Chromosome Location  IV: 10048686-10050509
Chromosome . Primary Identifier  IV Chromosome Location . Start  10048686
Chromosome Location . End  10050509 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04B2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011422 T04B2.3 T04B2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B2.3b T04B2.3b 810   IV: 10048686-10048703

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04B2.3b.1 10048686 10050509 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139876   18   IV: 10048686-10048703 Caenorhabditis elegans
Exon139878   153   IV: 10048748-10048900 Caenorhabditis elegans
Exon139880   312   IV: 10048944-10049255 Caenorhabditis elegans
Exon139882   123   IV: 10049300-10049422 Caenorhabditis elegans
Exon139884   75   IV: 10050261-10050335 Caenorhabditis elegans
Exon139885   129   IV: 10050381-10050509 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04B2.3b.1 10048686 10050509 1

1 Sequence

Length
810

1 Sequence Ontology Term

Identifier Name Description
transcript