WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01B6.1.1 Sequence Name  W01B6.1.1
Length (nt)  1427   Chromosome Location  IV: 10067816-10070251
Chromosome . Primary Identifier  IV Chromosome Location . Start  10067816
Chromosome Location . End  10070251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01B6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000858 cwn-2 W01B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01B6.1 W01B6.1 1083   IV: 10067875-10067954

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01B6.1.1 10067816 10070251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139863   139   IV: 10067816-10067954 Caenorhabditis elegans
Exon139864   154   IV: 10068209-10068362 Caenorhabditis elegans
Exon139865   386   IV: 10068411-10068796 Caenorhabditis elegans
Exon139866   136   IV: 10068841-10068976 Caenorhabditis elegans
Exon139867   161   IV: 10069023-10069183 Caenorhabditis elegans
Exon139868   451   IV: 10069801-10070251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01B6.1.1 10067816 10070251 1

1 Sequence

Length
1427

1 Sequence Ontology Term

Identifier Name Description
transcript