WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01B6.5.1 Sequence Name  W01B6.5.1
Length (nt)  1743   Chromosome Location  IV: 10076199-10078706
Chromosome . Primary Identifier  IV Chromosome Location . Start  10076199
Chromosome Location . End  10078706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01B6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012172 W01B6.5 W01B6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01B6.5 W01B6.5 1611   IV: 10076325-10076534

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01B6.5.1 10076199 10078706 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139883   48   IV: 10076199-10076246 Caenorhabditis elegans
Exon139884   237   IV: 10076298-10076534 Caenorhabditis elegans
Exon139885   364   IV: 10076781-10077144 Caenorhabditis elegans
Exon139886   164   IV: 10077307-10077470 Caenorhabditis elegans
Exon139887   322   IV: 10077514-10077835 Caenorhabditis elegans
Exon139888   167   IV: 10077892-10078058 Caenorhabditis elegans
Exon139889   219   IV: 10078161-10078379 Caenorhabditis elegans
Exon139890   114   IV: 10078438-10078551 Caenorhabditis elegans
Exon139891   108   IV: 10078599-10078706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01B6.5.1 10076199 10078706 1

1 Sequence

Length
1743

1 Sequence Ontology Term

Identifier Name Description
transcript