WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04G2.6.1 Sequence Name  C04G2.6.1
Length (nt)  3044   Chromosome Location  IV: 10097202-10106523
Chromosome . Primary Identifier  IV Chromosome Location . Start  10097202
Chromosome Location . End  10106523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001001 dis-3 C04G2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04G2.6 C04G2.6 2886   IV: 10097208-10097294

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04G2.6.1 10097202 10106523 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139938   93   IV: 10097202-10097294 Caenorhabditis elegans
Exon139939   197   IV: 10097342-10097538 Caenorhabditis elegans
Exon139940   316   IV: 10097712-10098027 Caenorhabditis elegans
Exon139941   241   IV: 10098346-10098586 Caenorhabditis elegans
Exon139942   439   IV: 10098810-10099248 Caenorhabditis elegans
Exon139943   302   IV: 10099306-10099607 Caenorhabditis elegans
Exon139944   401   IV: 10099726-10100126 Caenorhabditis elegans
Exon139945   165   IV: 10100984-10101148 Caenorhabditis elegans
Exon139946   157   IV: 10103674-10103830 Caenorhabditis elegans
Exon139947   196   IV: 10104484-10104679 Caenorhabditis elegans
Exon139948   121   IV: 10105197-10105317 Caenorhabditis elegans
Exon139949   127   IV: 10105838-10105964 Caenorhabditis elegans
Exon139950   289   IV: 10106235-10106523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04G2.6.1 10097202 10106523 1

1 Sequence

Length
3044

1 Sequence Ontology Term

Identifier Name Description
transcript