WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04G2.7.1 Sequence Name  C04G2.7.1
Length (nt)  1411   Chromosome Location  IV: 10106599-10110517
Chromosome . Primary Identifier  IV Chromosome Location . Start  10106599
Chromosome Location . End  10110517 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001204 egl-38 C04G2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04G2.7 C04G2.7 870   IV: 10107035-10107225

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04G2.7.1 10106599 10110517 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139951   627   IV: 10106599-10107225 Caenorhabditis elegans
Exon139952   214   IV: 10107471-10107684 Caenorhabditis elegans
Exon139953   66   IV: 10108523-10108588 Caenorhabditis elegans
Exon139954   119   IV: 10108670-10108788 Caenorhabditis elegans
Exon139955   65   IV: 10108945-10109009 Caenorhabditis elegans
Exon139956   151   IV: 10109188-10109338 Caenorhabditis elegans
Exon139957   169   IV: 10110349-10110517 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04G2.7.1 10106599 10110517 -1

1 Sequence

Length
1411

1 Sequence Ontology Term

Identifier Name Description
transcript