WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04G2.10a.1 Sequence Name  C04G2.10a.1
Length (nt)  1087   Chromosome Location  IV: 10115442-10118081
Chromosome . Primary Identifier  IV Chromosome Location . Start  10115442
Chromosome Location . End  10118081 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G2.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007309 C04G2.10 C04G2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04G2.10a C04G2.10a 969   IV: 10115500-10115562

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04G2.10a.1 10115442 10118081 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139965   121   IV: 10115442-10115562 Caenorhabditis elegans
Exon139967   94   IV: 10116768-10116861 Caenorhabditis elegans
Exon139970   725   IV: 10117165-10117889 Caenorhabditis elegans
Exon139974   147   IV: 10117935-10118081 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04G2.10a.1 10115442 10118081 1

1 Sequence

Length
1087

1 Sequence Ontology Term

Identifier Name Description
transcript