WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08F4.1.1 Sequence Name  K08F4.1.1
Length (nt)  2705   Chromosome Location  IV: 10122537-10126644
Chromosome . Primary Identifier  IV Chromosome Location . Start  10122537
Chromosome Location . End  10126644 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08F4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010676 ctf-18 K08F4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08F4.1 K08F4.1 2553   IV: 10122683-10122937

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08F4.1.1 10122537 10126644 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139983   401   IV: 10122537-10122937 Caenorhabditis elegans
Exon139984   216   IV: 10123387-10123602 Caenorhabditis elegans
Exon139985   264   IV: 10123651-10123914 Caenorhabditis elegans
Exon139986   264   IV: 10123969-10124232 Caenorhabditis elegans
Exon139987   253   IV: 10124280-10124532 Caenorhabditis elegans
Exon139988   458   IV: 10125108-10125565 Caenorhabditis elegans
Exon139989   169   IV: 10125611-10125779 Caenorhabditis elegans
Exon139990   203   IV: 10125823-10126025 Caenorhabditis elegans
Exon139991   239   IV: 10126072-10126310 Caenorhabditis elegans
Exon139992   167   IV: 10126353-10126519 Caenorhabditis elegans
Exon139993   71   IV: 10126574-10126644 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08F4.1.1 10122537 10126644 -1

1 Sequence

Length
2705

1 Sequence Ontology Term

Identifier Name Description
transcript