WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08F4.3.1 Sequence Name  K08F4.3.1
Length (nt)  796   Chromosome Location  IV: 10129257-10130244
Chromosome . Primary Identifier  IV Chromosome Location . Start  10129257
Chromosome Location . End  10130244 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010678 K08F4.3 K08F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08F4.3 K08F4.3 549   IV: 10129394-10129447

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08F4.3.1 10129257 10130244 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140001   191   IV: 10129257-10129447 Caenorhabditis elegans
Exon140002   105   IV: 10129500-10129604 Caenorhabditis elegans
Exon140003   235   IV: 10129699-10129933 Caenorhabditis elegans
Exon140004   265   IV: 10129980-10130244 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08F4.3.1 10129257 10130244 1

1 Sequence

Length
796

1 Sequence Ontology Term

Identifier Name Description
transcript