WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14G10.2b.2 Sequence Name  T14G10.2b.2
Length (nt)  4784   Chromosome Location  IV: 10164331-10174339
Chromosome . Primary Identifier  IV Chromosome Location . Start  10164331
Chromosome Location . End  10174339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2b T14G10.2b 3936   IV: 10165839-10165852

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2b.2 10164331 10174339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140119   316   IV: 10164331-10164646 Caenorhabditis elegans
Exon140129   314   IV: 10164696-10165009 Caenorhabditis elegans
Exon140136   139   IV: 10165395-10165533 Caenorhabditis elegans
Exon140145   84   IV: 10165769-10165852 Caenorhabditis elegans
Exon140152   156   IV: 10165965-10166120 Caenorhabditis elegans
Exon140162   237   IV: 10166468-10166704 Caenorhabditis elegans
Exon140172   229   IV: 10167020-10167248 Caenorhabditis elegans
Exon140182   277   IV: 10167299-10167575 Caenorhabditis elegans
Exon140192   240   IV: 10167623-10167862 Caenorhabditis elegans
Exon140202   201   IV: 10167908-10168108 Caenorhabditis elegans
Exon140212   739   IV: 10168165-10168903 Caenorhabditis elegans
Exon140224   1357   IV: 10168952-10170308 Caenorhabditis elegans
Exon140232   108   IV: 10170740-10170847 Caenorhabditis elegans
Exon140242   76   IV: 10171669-10171744 Caenorhabditis elegans
Exon140248   84   IV: 10173261-10173344 Caenorhabditis elegans
Exon140254   128   IV: 10174033-10174160 Caenorhabditis elegans
Exon140261   99   IV: 10174241-10174339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2b.2 10164331 10174339 -1

1 Sequence

Length
4784

1 Sequence Ontology Term

Identifier Name Description
transcript