WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14G10.2g.1 Sequence Name  T14G10.2g.1
Length (nt)  3441   Chromosome Location  IV: 10165839-10170299
Chromosome . Primary Identifier  IV Chromosome Location . Start  10165839
Chromosome Location . End  10170299 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.2g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2g T14G10.2g 3441   IV: 10165839-10165852

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2g.1 10165839 10170299 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140148   14   IV: 10165839-10165852 Caenorhabditis elegans
Exon140159   156   IV: 10165965-10166120 Caenorhabditis elegans
Exon140169   237   IV: 10166468-10166704 Caenorhabditis elegans
Exon140179   229   IV: 10167020-10167248 Caenorhabditis elegans
Exon140189   277   IV: 10167299-10167575 Caenorhabditis elegans
Exon140199   240   IV: 10167623-10167862 Caenorhabditis elegans
Exon140209   201   IV: 10167908-10168108 Caenorhabditis elegans
Exon140219   739   IV: 10168165-10168903 Caenorhabditis elegans
Exon140221   1348   IV: 10168952-10170299 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2g.1 10165839 10170299 -1

1 Sequence

Length
3441

1 Sequence Ontology Term

Identifier Name Description
transcript