WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14G10.2f.1 Sequence Name  T14G10.2f.1
Length (nt)  3567   Chromosome Location  IV: 10165839-10171677
Chromosome . Primary Identifier  IV Chromosome Location . Start  10165839
Chromosome Location . End  10171677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2f T14G10.2f 3567   IV: 10165839-10165852

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2f.1 10165839 10171677 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140149   14   IV: 10165839-10165852 Caenorhabditis elegans
Exon140158   156   IV: 10165965-10166120 Caenorhabditis elegans
Exon140168   237   IV: 10166468-10166704 Caenorhabditis elegans
Exon140178   229   IV: 10167020-10167248 Caenorhabditis elegans
Exon140188   277   IV: 10167299-10167575 Caenorhabditis elegans
Exon140198   240   IV: 10167623-10167862 Caenorhabditis elegans
Exon140208   201   IV: 10167908-10168108 Caenorhabditis elegans
Exon140218   739   IV: 10168165-10168903 Caenorhabditis elegans
Exon140229   1357   IV: 10168952-10170308 Caenorhabditis elegans
Exon140237   108   IV: 10170740-10170847 Caenorhabditis elegans
Exon140239   9   IV: 10171669-10171677 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2f.1 10165839 10171677 -1

1 Sequence

Length
3567

1 Sequence Ontology Term

Identifier Name Description
transcript