WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14G10.2e.1 Sequence Name  T14G10.2e.1
Length (nt)  3918   Chromosome Location  IV: 10164609-10170299
Chromosome . Primary Identifier  IV Chromosome Location . Start  10164609
Chromosome Location . End  10170299 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2e T14G10.2e 3918   IV: 10164609-10164646

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2e.1 10164609 10170299 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140178   38   IV: 10164609-10164646 Caenorhabditis elegans
Exon140188   314   IV: 10164696-10165009 Caenorhabditis elegans
Exon140196   139   IV: 10165395-10165533 Caenorhabditis elegans
Exon140212   156   IV: 10165965-10166120 Caenorhabditis elegans
Exon140222   237   IV: 10166468-10166704 Caenorhabditis elegans
Exon140232   229   IV: 10167020-10167248 Caenorhabditis elegans
Exon140242   277   IV: 10167299-10167575 Caenorhabditis elegans
Exon140252   240   IV: 10167623-10167862 Caenorhabditis elegans
Exon140262   201   IV: 10167908-10168108 Caenorhabditis elegans
Exon140272   739   IV: 10168165-10168903 Caenorhabditis elegans
Exon140275   1348   IV: 10168952-10170299 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2e.1 10164609 10170299 -1

1 Sequence

Length
3918

1 Sequence Ontology Term

Identifier Name Description
transcript