WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14G10.2b.5 Sequence Name  T14G10.2b.5
Length (nt)  4550   Chromosome Location  IV: 10164609-10174330
Chromosome . Primary Identifier  IV Chromosome Location . Start  10164609
Chromosome Location . End  10174330 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.2b.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2b T14G10.2b 3936   IV: 10165839-10165852

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2b.5 10164609 10174330 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140180   38   IV: 10164609-10164646 Caenorhabditis elegans
Exon140186   314   IV: 10164696-10165009 Caenorhabditis elegans
Exon140194   139   IV: 10165395-10165533 Caenorhabditis elegans
Exon140197   69   IV: 10165670-10165738 Caenorhabditis elegans
Exon140202   68   IV: 10165785-10165852 Caenorhabditis elegans
Exon140210   156   IV: 10165965-10166120 Caenorhabditis elegans
Exon140220   237   IV: 10166468-10166704 Caenorhabditis elegans
Exon140230   229   IV: 10167020-10167248 Caenorhabditis elegans
Exon140240   277   IV: 10167299-10167575 Caenorhabditis elegans
Exon140250   240   IV: 10167623-10167862 Caenorhabditis elegans
Exon140260   201   IV: 10167908-10168108 Caenorhabditis elegans
Exon140270   739   IV: 10168165-10168903 Caenorhabditis elegans
Exon140282   1357   IV: 10168952-10170308 Caenorhabditis elegans
Exon140290   108   IV: 10170740-10170847 Caenorhabditis elegans
Exon140300   76   IV: 10171669-10171744 Caenorhabditis elegans
Exon140306   84   IV: 10173261-10173344 Caenorhabditis elegans
Exon140312   128   IV: 10174033-10174160 Caenorhabditis elegans
Exon140315   90   IV: 10174241-10174330 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2b.5 10164609 10174330 -1

1 Sequence

Length
4550

1 Sequence Ontology Term

Identifier Name Description
transcript