WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04D7.1.2 Sequence Name  K04D7.1.2
Length (nt)  1039   Chromosome Location  IV: 10176680-10178099
Chromosome . Primary Identifier  IV Chromosome Location . Start  10176680
Chromosome Location . End  10178099 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04D7.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010556 rack-1 K04D7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.1 K04D7.1 978   IV: 10176710-10176824

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04D7.1.2 10176680 10178099 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140269   145   IV: 10176680-10176824 Caenorhabditis elegans
Exon140272   184   IV: 10176873-10177056 Caenorhabditis elegans
Exon140275   148   IV: 10177100-10177247 Caenorhabditis elegans
Exon140277   557   IV: 10177300-10177856 Caenorhabditis elegans
Exon140282   5   IV: 10178095-10178099 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04D7.1.2 10176680 10178099 1

1 Sequence

Length
1039

1 Sequence Ontology Term

Identifier Name Description
transcript