WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K04D7.2b Sequence Name  K04D7.2b
Length (nt)  1020   Chromosome Location  IV: 10177970-10178104
Chromosome . Primary Identifier  IV Chromosome Location . Start  10177970
Chromosome Location . End  10178104
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04D7.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28241 MSPN-1, isoform b 37.3 339 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00033943
WBRNAi00049895
WBRNAi00008034
WBRNAi00016588

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K04D7.2b 10177970 10178104 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010557 mspn-1 K04D7.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:K04D7.2b 10177970 10178104 1
CDS:K04D7.2b 10178157 10178268 1
CDS:K04D7.2b 10178314 10178488 1
CDS:K04D7.2b 10178543 10178984 1
CDS:K04D7.2b 10179786 10179941 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K04D7.2b.1 K04D7.2b.1 1374   IV: 10177970-10180295