WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04D7.5a.1 Sequence Name  K04D7.5a.1
Length (nt)  4090   Chromosome Location  IV: 10197817-10202993
Chromosome . Primary Identifier  IV Chromosome Location . Start  10197817
Chromosome Location . End  10202993 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04D7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001653 gon-4 K04D7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.5a K04D7.5a 4017   IV: 10197820-10197902

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04D7.5a.1 10197817 10202993 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140342   86   IV: 10197817-10197902 Caenorhabditis elegans
Exon140344   265   IV: 10197947-10198211 Caenorhabditis elegans
Exon140346   111   IV: 10198256-10198366 Caenorhabditis elegans
Exon140348   349   IV: 10198414-10198762 Caenorhabditis elegans
Exon140350   251   IV: 10198816-10199066 Caenorhabditis elegans
Exon140352   684   IV: 10199320-10200003 Caenorhabditis elegans
Exon140354   360   IV: 10200049-10200408 Caenorhabditis elegans
Exon140356   909   IV: 10200712-10201620 Caenorhabditis elegans
Exon140358   66   IV: 10201674-10201739 Caenorhabditis elegans
Exon140360   168   IV: 10201791-10201958 Caenorhabditis elegans
Exon140362   156   IV: 10202002-10202157 Caenorhabditis elegans
Exon140364   270   IV: 10202209-10202478 Caenorhabditis elegans
Exon140366   168   IV: 10202528-10202695 Caenorhabditis elegans
Exon140369   247   IV: 10202747-10202993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04D7.5a.1 10197817 10202993 1

1 Sequence

Length
4090

1 Sequence Ontology Term

Identifier Name Description
transcript