WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04D7.5b.1 Sequence Name  K04D7.5b.1
Length (nt)  4089   Chromosome Location  IV: 10197820-10202991
Chromosome . Primary Identifier  IV Chromosome Location . Start  10197820
Chromosome Location . End  10202991 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04D7.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001653 gon-4 K04D7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.5b K04D7.5b 3864   IV: 10197820-10197902

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04D7.5b.1 10197820 10202991 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140343   83   IV: 10197820-10197902 Caenorhabditis elegans
Exon140345   265   IV: 10197947-10198211 Caenorhabditis elegans
Exon140347   111   IV: 10198256-10198366 Caenorhabditis elegans
Exon140349   349   IV: 10198414-10198762 Caenorhabditis elegans
Exon140351   251   IV: 10198816-10199066 Caenorhabditis elegans
Exon140353   684   IV: 10199320-10200003 Caenorhabditis elegans
Exon140355   360   IV: 10200049-10200408 Caenorhabditis elegans
Exon140357   909   IV: 10200712-10201620 Caenorhabditis elegans
Exon140359   66   IV: 10201674-10201739 Caenorhabditis elegans
Exon140361   168   IV: 10201791-10201958 Caenorhabditis elegans
Exon140363   156   IV: 10202002-10202157 Caenorhabditis elegans
Exon140365   270   IV: 10202209-10202478 Caenorhabditis elegans
Exon140367   172   IV: 10202528-10202699 Caenorhabditis elegans
Exon140368   245   IV: 10202747-10202991 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04D7.5b.1 10197820 10202991 1

1 Sequence

Length
4089

1 Sequence Ontology Term

Identifier Name Description
transcript