WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24F3.5a.1 Sequence Name  C24F3.5a.1
Length (nt)  4719   Chromosome Location  IV: 10206189-10214911
Chromosome . Primary Identifier  IV Chromosome Location . Start  10206189
Chromosome Location . End  10214911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24F3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000019 abt-1 C24F3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24F3.5a C24F3.5a 4677   IV: 10206231-10206329

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24F3.5a.1 10206189 10214911 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140399   141   IV: 10206189-10206329 Caenorhabditis elegans
Exon140402   421   IV: 10206883-10207303 Caenorhabditis elegans
Exon140404   176   IV: 10207488-10207663 Caenorhabditis elegans
Exon140406   390   IV: 10207712-10208101 Caenorhabditis elegans
Exon140408   116   IV: 10208145-10208260 Caenorhabditis elegans
Exon140410   109   IV: 10208315-10208423 Caenorhabditis elegans
Exon140412   181   IV: 10208476-10208656 Caenorhabditis elegans
Exon140414   146   IV: 10208704-10208849 Caenorhabditis elegans
Exon140416   109   IV: 10209020-10209128 Caenorhabditis elegans
Exon140418   112   IV: 10209179-10209290 Caenorhabditis elegans
Exon140420   129   IV: 10209339-10209467 Caenorhabditis elegans
Exon140422   135   IV: 10209512-10209646 Caenorhabditis elegans
Exon140424   159   IV: 10209693-10209851 Caenorhabditis elegans
Exon140426   71   IV: 10209894-10209964 Caenorhabditis elegans
Exon140428   99   IV: 10210108-10210206 Caenorhabditis elegans
Exon140430   177   IV: 10210250-10210426 Caenorhabditis elegans
Exon140432   117   IV: 10210470-10210586 Caenorhabditis elegans
Exon140434   234   IV: 10210633-10210866 Caenorhabditis elegans
Exon140436   709   IV: 10211136-10211844 Caenorhabditis elegans
Exon140438   121   IV: 10211893-10212013 Caenorhabditis elegans
Exon140440   117   IV: 10212061-10212177 Caenorhabditis elegans
Exon140442   90   IV: 10212221-10212310 Caenorhabditis elegans
Exon140444   190   IV: 10213014-10213203 Caenorhabditis elegans
Exon140446   82   IV: 10213251-10213332 Caenorhabditis elegans
Exon140448   145   IV: 10213381-10213525 Caenorhabditis elegans
Exon140451   87   IV: 10214206-10214292 Caenorhabditis elegans
Exon140452   93   IV: 10214714-10214806 Caenorhabditis elegans
Exon140453   63   IV: 10214849-10214911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24F3.5a.1 10206189 10214911 -1

1 Sequence

Length
4719

1 Sequence Ontology Term

Identifier Name Description
transcript