WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04D7.5b.1 Sequence Name  K04D7.5b.1
Length (nt)  4089   Chromosome Location  IV: 10197820-10202991
Chromosome . Primary Identifier  IV Chromosome Location . Start  10197820
Chromosome Location . End  10202991 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04D7.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001653 gon-4 K04D7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.5b K04D7.5b 3864   IV: 10197820-10197902

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04D7.5b.1 10197820 10202991 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140398   83   IV: 10197820-10197902 Caenorhabditis elegans
Exon140400   265   IV: 10197947-10198211 Caenorhabditis elegans
Exon140402   111   IV: 10198256-10198366 Caenorhabditis elegans
Exon140404   349   IV: 10198414-10198762 Caenorhabditis elegans
Exon140406   251   IV: 10198816-10199066 Caenorhabditis elegans
Exon140408   684   IV: 10199320-10200003 Caenorhabditis elegans
Exon140410   360   IV: 10200049-10200408 Caenorhabditis elegans
Exon140412   909   IV: 10200712-10201620 Caenorhabditis elegans
Exon140414   66   IV: 10201674-10201739 Caenorhabditis elegans
Exon140416   168   IV: 10201791-10201958 Caenorhabditis elegans
Exon140418   156   IV: 10202002-10202157 Caenorhabditis elegans
Exon140420   270   IV: 10202209-10202478 Caenorhabditis elegans
Exon140422   172   IV: 10202528-10202699 Caenorhabditis elegans
Exon140423   245   IV: 10202747-10202991 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04D7.5b.1 10197820 10202991 1

1 Sequence

Length
4089

1 Sequence Ontology Term

Identifier Name Description
transcript