WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24F3.3.1 Sequence Name  C24F3.3.1
Length (nt)  1258   Chromosome Location  IV: 10224023-10226387
Chromosome . Primary Identifier  IV Chromosome Location . Start  10224023
Chromosome Location . End  10226387 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24F3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003531 nas-12 C24F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24F3.3 C24F3.3 1155   IV: 10224054-10224204

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24F3.3.1 10224023 10226387 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140477   182   IV: 10224023-10224204 Caenorhabditis elegans
Exon140478   148   IV: 10224247-10224394 Caenorhabditis elegans
Exon140479   293   IV: 10224748-10225040 Caenorhabditis elegans
Exon140480   311   IV: 10225097-10225407 Caenorhabditis elegans
Exon140481   99   IV: 10225516-10225614 Caenorhabditis elegans
Exon140482   225   IV: 10226163-10226387 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24F3.3.1 10224023 10226387 1

1 Sequence

Length
1258

1 Sequence Ontology Term

Identifier Name Description
transcript