WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G10.7.1 Sequence Name  F01G10.7.1
Length (nt)  1295   Chromosome Location  IV: 10239278-10241823
Chromosome . Primary Identifier  IV Chromosome Location . Start  10239278
Chromosome Location . End  10241823 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G10.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008510 lipl-7 F01G10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G10.7 F01G10.7 1230   IV: 10239324-10239401

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01G10.7.1 10239278 10241823 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140525   124   IV: 10239278-10239401 Caenorhabditis elegans
Exon140526   112   IV: 10239905-10240016 Caenorhabditis elegans
Exon140527   482   IV: 10240065-10240546 Caenorhabditis elegans
Exon140528   368   IV: 10240914-10241281 Caenorhabditis elegans
Exon140529   103   IV: 10241562-10241664 Caenorhabditis elegans
Exon140530   106   IV: 10241718-10241823 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01G10.7.1 10239278 10241823 -1

1 Sequence

Length
1295

1 Sequence Ontology Term

Identifier Name Description
transcript