WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G10.1.1 Sequence Name  F01G10.1.1
Length (nt)  1915   Chromosome Location  IV: 10243612-10245707
Chromosome . Primary Identifier  IV Chromosome Location . Start  10243612
Chromosome Location . End  10245707 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008506 tkt-1 F01G10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G10.1 F01G10.1 1857   IV: 10243616-10243736

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01G10.1.1 10243612 10245707 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140531   125   IV: 10243612-10243736 Caenorhabditis elegans
Exon140532   674   IV: 10243788-10244461 Caenorhabditis elegans
Exon140533   775   IV: 10244508-10245282 Caenorhabditis elegans
Exon140534   341   IV: 10245367-10245707 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01G10.1.1 10243612 10245707 1

1 Sequence

Length
1915

1 Sequence Ontology Term

Identifier Name Description
transcript