WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G10.10.1 Sequence Name  F01G10.10.1
Length (nt)  1801   Chromosome Location  IV: 10246160-10249785
Chromosome . Primary Identifier  IV Chromosome Location . Start  10246160
Chromosome Location . End  10249785 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G10.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008512 F01G10.10 F01G10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G10.10 F01G10.10 1689   IV: 10246162-10246248

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01G10.10.1 10246160 10249785 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140556   89   IV: 10246160-10246248 Caenorhabditis elegans
Exon140557   150   IV: 10246750-10246899 Caenorhabditis elegans
Exon140558   110   IV: 10246945-10247054 Caenorhabditis elegans
Exon140559   123   IV: 10247104-10247226 Caenorhabditis elegans
Exon140560   119   IV: 10247275-10247393 Caenorhabditis elegans
Exon140561   110   IV: 10247438-10247547 Caenorhabditis elegans
Exon140562   63   IV: 10247596-10247658 Caenorhabditis elegans
Exon140563   226   IV: 10248166-10248391 Caenorhabditis elegans
Exon140564   233   IV: 10248436-10248668 Caenorhabditis elegans
Exon140565   102   IV: 10248718-10248819 Caenorhabditis elegans
Exon140566   99   IV: 10248872-10248970 Caenorhabditis elegans
Exon140567   152   IV: 10249363-10249514 Caenorhabditis elegans
Exon140568   225   IV: 10249561-10249785 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01G10.10.1 10246160 10249785 1

1 Sequence

Length
1801

1 Sequence Ontology Term

Identifier Name Description
transcript