WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G10.9.1 Sequence Name  F01G10.9.1
Length (nt)  1657   Chromosome Location  IV: 10255742-10259657
Chromosome . Primary Identifier  IV Chromosome Location . Start  10255742
Chromosome Location . End  10259657 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G10.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008511 F01G10.9 F01G10.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G10.9 F01G10.9 1356   IV: 10256043-10256117

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01G10.9.1 10255742 10259657 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140559   376   IV: 10255742-10256117 Caenorhabditis elegans
Exon140560   521   IV: 10256298-10256818 Caenorhabditis elegans
Exon140561   128   IV: 10257277-10257404 Caenorhabditis elegans
Exon140562   185   IV: 10257451-10257635 Caenorhabditis elegans
Exon140563   204   IV: 10258315-10258518 Caenorhabditis elegans
Exon140564   97   IV: 10258566-10258662 Caenorhabditis elegans
Exon140565   146   IV: 10259512-10259657 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01G10.9.1 10255742 10259657 -1

1 Sequence

Length
1657

1 Sequence Ontology Term

Identifier Name Description
transcript