WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43C5A.1.1 Sequence Name  Y43C5A.1.1
Length (nt)  213   Chromosome Location  IV: 10268975-10269187
Chromosome . Primary Identifier  IV Chromosome Location . Start  10268975
Chromosome Location . End  10269187 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43C5A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012781 nspd-7 Y43C5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43C5A.1 Y43C5A.1 213   IV: 10268975-10269187

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43C5A.1.1 10268975 10269187 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

1 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140566   213   IV: 10268975-10269187 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43C5A.1.1 10268975 10269187 -1

1 Sequence

Length
213

1 Sequence Ontology Term

Identifier Name Description
transcript